This is Sihao's personal page. Please feel free to have a look at the profiles and the GitHub repos.
(* Equal contribution)
Xu, Z.*, Zheng, X.*, Fan, J.*, Jiao, Y., Huang, S., Xie, Y., Xu, S., Lu, Y., Liu, A., Liu, R., Yang, Y., Luo, G., Pan, T. and Wang, X., 2024. Microbiome-induced reprogramming in post-transcriptional landscape using nanopore direct RNA sequencing. Cell Reports, 43(10). Link PubMed
Huang, S.*, Wylder, A.C.* and Pan, T., 2024. Simultaneous nanopore profiling of mRNA m6A and pseudouridine reveals translation coordination. Nature Biotechnology, pp.1-5. Link PubMed
Hou, Y., Zhang, W., McGilvray, P.T., Sobczyk, M., Wang, T., Weng, S.H.S., Huff, A., Huang, S., Pena, N., Katanski, C. and Pan, T., 2023. Engineered mischarged transfer RNAs for correcting pathogenic missense mutations. Molecular Therapy. Link Link Related report PubMed
Wang, Y., Zhang, R., Huang, S., Valverde, P.T.T., Lobb-Rabe, M., Ashley, J., Venkatasubramanian, L. and Carrillo, R.A., 2023. Glial Draper signaling triggers cross-neuron plasticity in bystander neurons after neuronal cell death in Drosophila. Nature Communications 14, 4452. Link PubMed
Katanski, C.D., Alshammary, H., Watkins, C.P., Huang, S., Gonzales-Reiche, A., Sordillo, E.M., van Bakel, H., Lolans, K., Simon, V., Pan, T. and Mount Sinai PSP study group, 2022. tRNA abundance, modification and fragmentation in nasopharyngeal swabs as biomarkers for COVID-19 severity. Frontiers in Cell and Developmental Biology, 10. Link PubMed
Huang, S., Zhang, W., Katanski, C.D., Dersh, D., Dai, Q., Lolans, K., Yewdell, J., Eren, A.M. and Pan, T., 2021. Interferon inducible pseudouridine modification in human mRNA by quantitative nanopore profiling. Genome biology, 22(1), pp.1-14. Link Related report Related abstract PubMed
Shu, X.*, Liu, M.*, Lu, Z.*, Zhu, C., Meng, H., Huang, S., Zhang, X. and Yi, C., 2018. Genome-wide mapping reveals that deoxyuridine is enriched in the human centromeric DNA. Nature Chemical Biology, 14(7), pp.680-687. Link PubMed
Huang, S., 2024. Investigation of Messenger RNA Modifications in Nanopore Sequencing Data by Machine Learning Methods. Link
Wang, Y., Zhang, R., Huang, S., Valverde, P.T.T., Lobb-Rabe, M., Ashley, J., Venkatasubramanian, L. and Carrillo, R.A., 2023. Glial Draper signaling triggers cross-neuron plasticity in bystander neurons after neuronal cell death. bioRxiv, pp.2023-04. Link